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SRX26025584: Cyclura pinguis Hi-C sequencing
1 ILLUMINA (Illumina NovaSeq 6000) run: 475.3M spots, 143.6G bases, 48.6Gb downloads

Design: Omni-C Dovetail manufacturer's protocol
Submitted by: G10K
Study: Cyclura pinguis (stout iguana) genome, rCycPin1, sequence data
show Abstracthide Abstract
Stout iguana (Cyclura pinguis) is a critically endangered species of lizard of the genus Cyclura belonging to the family Iguanidae. The species can be found exclusively in Anegada and Guana islands of the British Virgin Islands. Historically, it inhabited the islands of Puerto Rico and Saint Thomas; however, the animal's original range has been greatly diminished over prehistory (from Wikipedia). This sample was collected from an adult male born in the San Diego Zoo, coordinated by Oliver Ryder and Cynthia Steiner, and used to create at high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis, with funding support from HHMI.
Sample: Animal sample from Cyclura pinguis (stout iguana) for VGP reference genome, rCycPin1
SAMN35151422 • SRS22256921 • All experiments • All runs
Organism: Cyclura pinguis
Library:
Name: rCycPin1_HiC_1
Instrument: Illumina NovaSeq 6000
Strategy: Hi-C
Source: GENOMIC
Selection: Restriction Digest
Layout: PAIRED
Runs: 1 run, 475.3M spots, 143.6G bases, 48.6Gb
Run# of Spots# of BasesSizePublished
SRR30602954475,332,448143.6G48.6Gb2024-09-09

ID:
35130236

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